Shoko manages to stealthily get hold of Suzume's magical flute and straight away heads to her grandfather, the Samurai Warlord / On a regular day at surveillance, Shun notices all the lakes drying up and it isn't difficult to guess that it is Shoko behind the hideous act.

Hiro doesn't feel like sharing. Futo and Suzume look for a sharing magic mirror for him. Unfortunately, Hiro finds himself trapped inside it with Ashida in control! Ashida has sent puffs of pollen that spins the Ninja Master's magic out of control. Hiro, Futo and Suzume set out to fetch the antidote.

Hiro gets stuck as a koi fish and is scooped up by Shoko when saving some captured fish. Will they save him before Shoko realizes that the pretty fish is her sworn enemy? A mythical spirit returns to Earth as an animal. Ashida hopes to turn it into a powerful samurai. The Mini Ninjas must find it before Shoko does. But, what animal has it turned into this time?

The Mini Ninjas are on a mission to retrieve the Ninja Master's important scroll. Kunochi dreamed about an ancient and sacred vase. No one knows what magic is locked up within it. The Mini Ninjas' mission is to get the sacred vase before Ashida does.

Ashida has decided to build a road straight through the village! Our heroes lack the skills to stop the evil plans. The Ninja Master will have to help with some powerful kuji magic! The Mini Ninjas discover a baby panda, a Pandakuji. It is an animal with magic that can instantly grow enormous. They must prevent Ashida from turning all the Pandakujis into samurai warriors.

The armor of Kuro Zawa makes anyone wearing it undefeatable. The Mini Ninjas have to get the suit of armor before Shoko does. However, finding it inside a temple full of magical tricks and traps will be no easy task. The Ninja Master has his students playing a game that aims to improve their skills.